Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm11779-201ENSMUST00000118541 368 ntBASIC26.27■■□□□ 1.8
Rpap1Q80TE0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC26.27■■□□□ 1.8
Rpap1Q80TE0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC26.27■■□□□ 1.8
Rpap1Q80TE0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rpap1Q80TE0 Grk6-206ENSMUST00000224995 2971 ntBASIC26.27■■□□□ 1.8
Rpap1Q80TE0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rpap1Q80TE0 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rpap1Q80TE0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rpap1Q80TE0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC26.26■■□□□ 1.79
Rpap1Q80TE0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Rpap1Q80TE0 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rpap1Q80TE0 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC26.26■■□□□ 1.79
Rpap1Q80TE0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Rpap1Q80TE0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rpap1Q80TE0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rpap1Q80TE0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rpap1Q80TE0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rpap1Q80TE0 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Rpap1Q80TE0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rpap1Q80TE0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC26.24■■□□□ 1.79
Rpap1Q80TE0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rpap1Q80TE0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Rpap1Q80TE0 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rpap1Q80TE0 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rpap1Q80TE0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rpap1Q80TE0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rpap1Q80TE0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rpap1Q80TE0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rpap1Q80TE0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rpap1Q80TE0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rpap1Q80TE0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC26.23■■□□□ 1.79
Rpap1Q80TE0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rpap1Q80TE0 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC26.23■■□□□ 1.79
Rpap1Q80TE0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rpap1Q80TE0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rpap1Q80TE0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rpap1Q80TE0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rpap1Q80TE0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rpap1Q80TE0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rpap1Q80TE0 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rpap1Q80TE0 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Gm18856-201ENSMUST00000178096 1374 ntBASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rpap1Q80TE0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Rpap1Q80TE0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Rpap1Q80TE0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Rpap1Q80TE0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Rpap1Q80TE0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
Rpap1Q80TE0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Rpap1Q80TE0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Rpap1Q80TE0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rpap1Q80TE0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Rpap1Q80TE0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Rpap1Q80TE0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rpap1Q80TE0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rpap1Q80TE0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC26.2■■□□□ 1.78
Rpap1Q80TE0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rpap1Q80TE0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC26.2■■□□□ 1.78
Rpap1Q80TE0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Rpap1Q80TE0 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Rpap1Q80TE0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms