Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.63■□□□□ 0.09
Pif1Q80SX8 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.63■□□□□ 0.09
Pif1Q80SX8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.63■□□□□ 0.09
Pif1Q80SX8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pif1Q80SX8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pif1Q80SX8 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pif1Q80SX8 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pif1Q80SX8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pif1Q80SX8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pif1Q80SX8 Idnk-204ENSMUST00000226010 1898 ntBASIC15.63■□□□□ 0.09
Pif1Q80SX8 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.62■□□□□ 0.09
Pif1Q80SX8 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Gm27742-201ENSMUST00000184667 60 ntBASIC15.62■□□□□ 0.09
Pif1Q80SX8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.62■□□□□ 0.09
Pif1Q80SX8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pif1Q80SX8 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.61■□□□□ 0.09
Pif1Q80SX8 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.61■□□□□ 0.09
Pif1Q80SX8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.61■□□□□ 0.09
Pif1Q80SX8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pif1Q80SX8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.6■□□□□ 0.09
Pif1Q80SX8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Gm45328-201ENSMUST00000210942 917 ntBASIC15.6■□□□□ 0.09
Pif1Q80SX8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.6■□□□□ 0.09
Pif1Q80SX8 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.6■□□□□ 0.09
Pif1Q80SX8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.6■□□□□ 0.09
Pif1Q80SX8 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pif1Q80SX8 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pif1Q80SX8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pif1Q80SX8 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.59■□□□□ 0.09
Pif1Q80SX8 Mir8112-201ENSMUST00000184382 131 ntBASIC15.59■□□□□ 0.09
Pif1Q80SX8 AC133598.3-202ENSMUST00000224219 531 ntBASIC15.59■□□□□ 0.09
Pif1Q80SX8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Pif1Q80SX8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pif1Q80SX8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pif1Q80SX8 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pif1Q80SX8 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pif1Q80SX8 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pif1Q80SX8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pif1Q80SX8 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pif1Q80SX8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pif1Q80SX8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Pif1Q80SX8 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pif1Q80SX8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pif1Q80SX8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.58■□□□□ 0.09
Pif1Q80SX8 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.58■□□□□ 0.09
Pif1Q80SX8 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pif1Q80SX8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pif1Q80SX8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Pif1Q80SX8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms