Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Gm11780-201ENSMUST00000136880 516 ntBASIC20.52■□□□□ 0.87
Sned1Q70E20 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sned1Q70E20 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sned1Q70E20 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Sned1Q70E20 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sned1Q70E20 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sned1Q70E20 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sned1Q70E20 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sned1Q70E20 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sned1Q70E20 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.51■□□□□ 0.87
Sned1Q70E20 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Sned1Q70E20 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC20.51■□□□□ 0.87
Sned1Q70E20 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sned1Q70E20 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sned1Q70E20 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sned1Q70E20 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sned1Q70E20 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sned1Q70E20 Gm8097-201ENSMUST00000117903 829 ntBASIC20.5■□□□□ 0.87
Sned1Q70E20 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Sned1Q70E20 Gm6184-201ENSMUST00000120403 1261 ntBASIC20.5■□□□□ 0.87
Sned1Q70E20 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sned1Q70E20 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC20.5■□□□□ 0.87
Sned1Q70E20 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sned1Q70E20 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
Sned1Q70E20 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sned1Q70E20 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC20.5■□□□□ 0.87
Sned1Q70E20 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
Sned1Q70E20 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sned1Q70E20 Gm5648-201ENSMUST00000122244 1587 ntBASIC20.5■□□□□ 0.87
Sned1Q70E20 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sned1Q70E20 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sned1Q70E20 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sned1Q70E20 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sned1Q70E20 AC154757.1-201ENSMUST00000228289 336 ntBASIC20.49■□□□□ 0.87
Sned1Q70E20 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.49■□□□□ 0.87
Sned1Q70E20 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Sned1Q70E20 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sned1Q70E20 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sned1Q70E20 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.48■□□□□ 0.87
Sned1Q70E20 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sned1Q70E20 Gm15442-201ENSMUST00000117905 1527 ntBASIC20.48■□□□□ 0.87
Sned1Q70E20 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Sned1Q70E20 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sned1Q70E20 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sned1Q70E20 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Sned1Q70E20 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.48■□□□□ 0.87
Sned1Q70E20 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sned1Q70E20 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sned1Q70E20 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Sned1Q70E20 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Sned1Q70E20 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sned1Q70E20 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sned1Q70E20 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Sned1Q70E20 Gfra2-202ENSMUST00000227633 1480 ntBASIC20.47■□□□□ 0.87
Sned1Q70E20 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Sned1Q70E20 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.47■□□□□ 0.87
Sned1Q70E20 Chchd1-203ENSMUST00000224633 557 ntBASIC20.47■□□□□ 0.87
Sned1Q70E20 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Sned1Q70E20 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sned1Q70E20 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.47■□□□□ 0.87
Sned1Q70E20 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Sned1Q70E20 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sned1Q70E20 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sned1Q70E20 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sned1Q70E20 Gm12497-201ENSMUST00000138778 237 ntBASIC20.46■□□□□ 0.87
Sned1Q70E20 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sned1Q70E20 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sned1Q70E20 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sned1Q70E20 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sned1Q70E20 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Sned1Q70E20 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Sned1Q70E20 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sned1Q70E20 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.45■□□□□ 0.86
Sned1Q70E20 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC20.45■□□□□ 0.86
Sned1Q70E20 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.45■□□□□ 0.86
Sned1Q70E20 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sned1Q70E20 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sned1Q70E20 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sned1Q70E20 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sned1Q70E20 Gm15920-201ENSMUST00000118998 402 ntBASIC20.44■□□□□ 0.86
Sned1Q70E20 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Sned1Q70E20 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sned1Q70E20 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.44■□□□□ 0.86
Sned1Q70E20 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sned1Q70E20 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.44■□□□□ 0.86
Sned1Q70E20 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sned1Q70E20 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sned1Q70E20 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sned1Q70E20 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sned1Q70E20 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sned1Q70E20 Gm4459-201ENSMUST00000118750 468 ntBASIC20.44■□□□□ 0.86
Sned1Q70E20 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.44■□□□□ 0.86
Sned1Q70E20 Gm14057-201ENSMUST00000120631 482 ntBASIC20.44■□□□□ 0.86
Sned1Q70E20 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.44■□□□□ 0.86
Sned1Q70E20 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.44■□□□□ 0.86
Sned1Q70E20 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sned1Q70E20 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sned1Q70E20 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sned1Q70E20 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sned1Q70E20 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms