Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm25016-201ENSMUST00000158399 131 ntBASIC17.76■□□□□ 0.43
Hmgb4Q6P8W9 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb4Q6P8W9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb4Q6P8W9 Gm21559-201ENSMUST00000220638 855 ntBASIC17.76■□□□□ 0.43
Hmgb4Q6P8W9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb4Q6P8W9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb4Q6P8W9 Gm8587-201ENSMUST00000076538 843 ntBASIC17.76■□□□□ 0.43
Hmgb4Q6P8W9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb4Q6P8W9 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb4Q6P8W9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb4Q6P8W9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Hmgb4Q6P8W9 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Hmgb4Q6P8W9 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Gm7284-201ENSMUST00000131667 944 ntBASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Gm37025-201ENSMUST00000195159 829 ntBASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Hmgb4Q6P8W9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Hmgb4Q6P8W9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Gm7213-201ENSMUST00000215977 950 ntBASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Hmgb4Q6P8W9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Ank2-226ENSMUST00000189368 339 ntBASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgb4Q6P8W9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgb4Q6P8W9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.71■□□□□ 0.43
Hmgb4Q6P8W9 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgb4Q6P8W9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgb4Q6P8W9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgb4Q6P8W9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgb4Q6P8W9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgb4Q6P8W9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgb4Q6P8W9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.71■□□□□ 0.43
Hmgb4Q6P8W9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgb4Q6P8W9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms