Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg2Q6NS82 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Retreg2Q6NS82 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retreg2Q6NS82 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.27■□□□□ 0.51
Retreg2Q6NS82 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retreg2Q6NS82 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Gm10418-201ENSMUST00000100943 576 ntBASIC18.25■□□□□ 0.51
Retreg2Q6NS82 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Gm29791-202ENSMUST00000207888 369 ntBASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retreg2Q6NS82 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Retreg2Q6NS82 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg2Q6NS82 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.24■□□□□ 0.51
Retreg2Q6NS82 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg2Q6NS82 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg2Q6NS82 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg2Q6NS82 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg2Q6NS82 Mir8112-201ENSMUST00000184382 131 ntBASIC18.24■□□□□ 0.51
Retreg2Q6NS82 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.24■□□□□ 0.51
Retreg2Q6NS82 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg2Q6NS82 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retreg2Q6NS82 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Retreg2Q6NS82 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retreg2Q6NS82 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms