Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdzrn3Q69ZS0 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Pdzrn3Q69ZS0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Pdzrn3Q69ZS0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pdzrn3Q69ZS0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Pdzrn3Q69ZS0 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
Pdzrn3Q69ZS0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Pdzrn3Q69ZS0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdzrn3Q69ZS0 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Gm3272-201ENSMUST00000181181 1229 ntBASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Gm10566-201ENSMUST00000086739 996 ntBASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdzrn3Q69ZS0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Gm6623-201ENSMUST00000173570 544 ntBASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pdzrn3Q69ZS0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Actl10-202ENSMUST00000226583 1501 ntBASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Gm11860-201ENSMUST00000122346 1010 ntBASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Gm27742-201ENSMUST00000184667 60 ntBASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdzrn3Q69ZS0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdzrn3Q69ZS0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms