Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ctr9Q62018 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ctr9Q62018 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ctr9Q62018 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ctr9Q62018 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ctr9Q62018 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.98■□□□□ 0.79
Ctr9Q62018 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ctr9Q62018 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ctr9Q62018 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ctr9Q62018 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ctr9Q62018 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ctr9Q62018 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ctr9Q62018 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ctr9Q62018 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ctr9Q62018 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.98■□□□□ 0.79
Ctr9Q62018 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.98■□□□□ 0.79
Ctr9Q62018 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ctr9Q62018 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ctr9Q62018 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ctr9Q62018 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ctr9Q62018 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ctr9Q62018 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ctr9Q62018 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ctr9Q62018 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.97■□□□□ 0.79
Ctr9Q62018 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ctr9Q62018 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ctr9Q62018 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ctr9Q62018 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ctr9Q62018 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ctr9Q62018 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ctr9Q62018 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Ctr9Q62018 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.97■□□□□ 0.79
Ctr9Q62018 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ctr9Q62018 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ctr9Q62018 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ctr9Q62018 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.96■□□□□ 0.79
Ctr9Q62018 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ctr9Q62018 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.96■□□□□ 0.79
Ctr9Q62018 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ctr9Q62018 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Ctr9Q62018 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ctr9Q62018 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ctr9Q62018 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctr9Q62018 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctr9Q62018 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctr9Q62018 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctr9Q62018 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ctr9Q62018 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.95■□□□□ 0.78
Ctr9Q62018 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctr9Q62018 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctr9Q62018 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.95■□□□□ 0.78
Ctr9Q62018 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctr9Q62018 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctr9Q62018 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ctr9Q62018 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctr9Q62018 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctr9Q62018 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ctr9Q62018 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctr9Q62018 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctr9Q62018 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.94■□□□□ 0.78
Ctr9Q62018 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ctr9Q62018 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ctr9Q62018 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ctr9Q62018 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctr9Q62018 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctr9Q62018 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC19.94■□□□□ 0.78
Ctr9Q62018 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctr9Q62018 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ctr9Q62018 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.94■□□□□ 0.78
Ctr9Q62018 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.93■□□□□ 0.78
Ctr9Q62018 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Ctr9Q62018 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Ctr9Q62018 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.93■□□□□ 0.78
Ctr9Q62018 Gm5587-201ENSMUST00000206270 674 ntBASIC19.93■□□□□ 0.78
Ctr9Q62018 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ctr9Q62018 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms