Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Foxc1Q61572 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Foxc1Q61572 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Foxc1Q61572 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Foxc1Q61572 Gm10517-202ENSMUST00000192970 758 ntBASIC12.46□□□□□ -0.41
Foxc1Q61572 Gm30025-201ENSMUST00000218555 728 ntBASIC12.46□□□□□ -0.41
Foxc1Q61572 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Foxc1Q61572 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Foxc1Q61572 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Foxc1Q61572 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Foxc1Q61572 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Foxc1Q61572 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Foxc1Q61572 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Foxc1Q61572 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Foxc1Q61572 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.46□□□□□ -0.42
Foxc1Q61572 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Foxc1Q61572 Gm15635-204ENSMUST00000208024 2539 ntBASIC12.46□□□□□ -0.42
Foxc1Q61572 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.46□□□□□ -0.42
Foxc1Q61572 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Foxc1Q61572 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Foxc1Q61572 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Foxc1Q61572 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Foxc1Q61572 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Foxc1Q61572 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.45□□□□□ -0.42
Foxc1Q61572 AC156016.1-201ENSMUST00000227190 1035 ntBASIC12.45□□□□□ -0.42
Foxc1Q61572 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Foxc1Q61572 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Foxc1Q61572 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Foxc1Q61572 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Idnk-204ENSMUST00000226010 1898 ntBASIC12.44□□□□□ -0.42
Foxc1Q61572 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Gm38116-201ENSMUST00000193873 1533 ntBASIC12.44□□□□□ -0.42
Foxc1Q61572 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxc1Q61572 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.44□□□□□ -0.42
Foxc1Q61572 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.44□□□□□ -0.42
Foxc1Q61572 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.44□□□□□ -0.42
Foxc1Q61572 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.44□□□□□ -0.42
Foxc1Q61572 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxc1Q61572 Odf3b-204ENSMUST00000227834 930 ntBASIC12.44□□□□□ -0.42
Foxc1Q61572 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.44□□□□□ -0.42
Foxc1Q61572 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.44□□□□□ -0.42
Foxc1Q61572 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.44□□□□□ -0.42
Foxc1Q61572 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Foxc1Q61572 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Foxc1Q61572 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.43□□□□□ -0.42
Foxc1Q61572 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms