Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Gm11355-201ENSMUST00000121120 306 ntBASIC17.68■□□□□ 0.42
Smarcd1Q61466 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.68■□□□□ 0.42
Smarcd1Q61466 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Smarcd1Q61466 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Gm9013-201ENSMUST00000132939 882 ntBASIC17.67■□□□□ 0.42
Smarcd1Q61466 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.67■□□□□ 0.42
Smarcd1Q61466 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Smarcd1Q61466 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd1Q61466 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.66■□□□□ 0.42
Smarcd1Q61466 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.66■□□□□ 0.42
Smarcd1Q61466 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd1Q61466 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Smarcd1Q61466 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd1Q61466 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd1Q61466 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Smarcd1Q61466 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd1Q61466 Gm25016-201ENSMUST00000158399 131 ntBASIC17.66■□□□□ 0.42
Smarcd1Q61466 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.66■□□□□ 0.42
Smarcd1Q61466 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.66■□□□□ 0.42
Smarcd1Q61466 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd1Q61466 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd1Q61466 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd1Q61466 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Smarcd1Q61466 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd1Q61466 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.66■□□□□ 0.42
Smarcd1Q61466 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Smarcd1Q61466 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.65■□□□□ 0.42
Smarcd1Q61466 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Smarcd1Q61466 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcd1Q61466 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Smarcd1Q61466 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Gm13186-201ENSMUST00000118031 316 ntBASIC17.64■□□□□ 0.41
Smarcd1Q61466 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Gm6345-202ENSMUST00000180900 204 ntBASIC17.64■□□□□ 0.41
Smarcd1Q61466 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Gm5587-201ENSMUST00000206270 674 ntBASIC17.64■□□□□ 0.41
Smarcd1Q61466 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms