Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ptch1Q61115 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC24.48■■□□□ 1.51
Ptch1Q61115 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ptch1Q61115 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ptch1Q61115 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ptch1Q61115 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptch1Q61115 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptch1Q61115 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
Ptch1Q61115 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC24.47■■□□□ 1.51
Ptch1Q61115 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptch1Q61115 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptch1Q61115 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptch1Q61115 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptch1Q61115 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptch1Q61115 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptch1Q61115 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ptch1Q61115 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ptch1Q61115 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ptch1Q61115 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ptch1Q61115 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ptch1Q61115 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC24.46■■□□□ 1.51
Ptch1Q61115 Gm6089-201ENSMUST00000197666 938 ntBASIC24.46■■□□□ 1.51
Ptch1Q61115 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ptch1Q61115 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ptch1Q61115 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ptch1Q61115 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ptch1Q61115 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Ptch1Q61115 AC151286.1-201ENSMUST00000198489 145 ntBASIC24.45■■□□□ 1.51
Ptch1Q61115 AC127349.1-201ENSMUST00000224590 266 ntBASIC24.45■■□□□ 1.51
Ptch1Q61115 Bloc1s5-203ENSMUST00000224902 612 ntBASIC24.45■■□□□ 1.51
Ptch1Q61115 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ptch1Q61115 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC24.45■■□□□ 1.5
Ptch1Q61115 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ptch1Q61115 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ptch1Q61115 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ptch1Q61115 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Ptch1Q61115 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ptch1Q61115 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC24.44■■□□□ 1.5
Ptch1Q61115 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC24.44■■□□□ 1.5
Ptch1Q61115 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ptch1Q61115 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ptch1Q61115 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ptch1Q61115 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ptch1Q61115 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ptch1Q61115 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Ptch1Q61115 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ptch1Q61115 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ptch1Q61115 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
Ptch1Q61115 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ptch1Q61115 AC084391.1-201ENSMUST00000200651 141 ntBASIC24.44■■□□□ 1.5
Ptch1Q61115 Gm45683-201ENSMUST00000210825 1247 ntBASIC24.44■■□□□ 1.5
Ptch1Q61115 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ptch1Q61115 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ptch1Q61115 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ptch1Q61115 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ptch1Q61115 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ptch1Q61115 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ptch1Q61115 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ptch1Q61115 Gm11780-201ENSMUST00000136880 516 ntBASIC24.43■■□□□ 1.5
Ptch1Q61115 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC24.43■■□□□ 1.5
Ptch1Q61115 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ptch1Q61115 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ptch1Q61115 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ptch1Q61115 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
Ptch1Q61115 Gfra2-202ENSMUST00000227633 1480 ntBASIC24.42■■□□□ 1.5
Ptch1Q61115 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptch1Q61115 Gm5648-201ENSMUST00000122244 1587 ntBASIC24.42■■□□□ 1.5
Ptch1Q61115 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptch1Q61115 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptch1Q61115 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptch1Q61115 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptch1Q61115 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC24.42■■□□□ 1.5
Ptch1Q61115 Gm8097-201ENSMUST00000117903 829 ntBASIC24.42■■□□□ 1.5
Ptch1Q61115 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ptch1Q61115 Gm15442-201ENSMUST00000117905 1527 ntBASIC24.42■■□□□ 1.5
Ptch1Q61115 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ptch1Q61115 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Ptch1Q61115 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Ptch1Q61115 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptch1Q61115 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptch1Q61115 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptch1Q61115 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptch1Q61115 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptch1Q61115 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ptch1Q61115 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ptch1Q61115 Gm26308-201ENSMUST00000157768 69 ntBASIC24.41■■□□□ 1.5
Ptch1Q61115 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptch1Q61115 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptch1Q61115 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ptch1Q61115 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC24.41■■□□□ 1.5
Ptch1Q61115 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ptch1Q61115 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ptch1Q61115 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ptch1Q61115 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Ptch1Q61115 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC24.4■■□□□ 1.5
Ptch1Q61115 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ptch1Q61115 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
Ptch1Q61115 Gm6184-201ENSMUST00000120403 1261 ntBASIC24.4■■□□□ 1.5
Ptch1Q61115 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ptch1Q61115 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC24.4■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms