Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shroom1Q5SX79 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Gm26039-201ENSMUST00000158152 144 ntBASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Shroom1Q5SX79 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shroom1Q5SX79 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Shroom1Q5SX79 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shroom1Q5SX79 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shroom1Q5SX79 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shroom1Q5SX79 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.02■□□□□ 0.48
Shroom1Q5SX79 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shroom1Q5SX79 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.02■□□□□ 0.48
Shroom1Q5SX79 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shroom1Q5SX79 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shroom1Q5SX79 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Shroom1Q5SX79 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.02■□□□□ 0.47
Shroom1Q5SX79 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.02■□□□□ 0.47
Shroom1Q5SX79 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Gm17808-201ENSMUST00000200859 894 ntBASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Shroom1Q5SX79 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Shroom1Q5SX79 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18■□□□□ 0.47
Shroom1Q5SX79 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Shroom1Q5SX79 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Shroom1Q5SX79 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18■□□□□ 0.47
Shroom1Q5SX79 Actl10-202ENSMUST00000226583 1501 ntBASIC18■□□□□ 0.47
Shroom1Q5SX79 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Shroom1Q5SX79 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Shroom1Q5SX79 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Shroom1Q5SX79 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Shroom1Q5SX79 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shroom1Q5SX79 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shroom1Q5SX79 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18■□□□□ 0.47
Shroom1Q5SX79 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shroom1Q5SX79 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Shroom1Q5SX79 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
Shroom1Q5SX79 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shroom1Q5SX79 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Shroom1Q5SX79 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Shroom1Q5SX79 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms