Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Ctc1Q5SUQ9 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctc1Q5SUQ9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ctc1Q5SUQ9 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ctc1Q5SUQ9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Gm6345-202ENSMUST00000180900 204 ntBASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ctc1Q5SUQ9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Gm27741-201ENSMUST00000185060 237 ntBASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Gm33142-201ENSMUST00000193913 867 ntBASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ctc1Q5SUQ9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Gm2274-201ENSMUST00000184539 609 ntBASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ctc1Q5SUQ9 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ctc1Q5SUQ9 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Ctc1Q5SUQ9 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Ctc1Q5SUQ9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ctc1Q5SUQ9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.89■□□□□ 0.45
Ctc1Q5SUQ9 Mir5130-201ENSMUST00000175160 84 ntBASIC17.89■□□□□ 0.45
Ctc1Q5SUQ9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctc1Q5SUQ9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctc1Q5SUQ9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.89■□□□□ 0.45
Ctc1Q5SUQ9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctc1Q5SUQ9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ctc1Q5SUQ9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ctc1Q5SUQ9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms