Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav7d-4Q5R1H9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Gm10418-201ENSMUST00000100943 576 ntBASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav7d-4Q5R1H9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Gm13534-201ENSMUST00000121169 513 ntBASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Gm14117-201ENSMUST00000122417 843 ntBASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav7d-4Q5R1H9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Gm13146-201ENSMUST00000118508 780 ntBASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Gm19430-201ENSMUST00000193847 2137 ntBASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Gm43173-201ENSMUST00000202246 593 ntBASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav7d-4Q5R1H9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-4Q5R1H9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-4Q5R1H9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Trav7d-4Q5R1H9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-4Q5R1H9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-4Q5R1H9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-4Q5R1H9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-4Q5R1H9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.96□□□□□ -0.34
Trav7d-4Q5R1H9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-4Q5R1H9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav7d-4Q5R1H9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms