Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav6-3Q5R1E6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Trmt13-210ENSMUST00000198454 880 ntBASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav6-3Q5R1E6 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Gm37856-201ENSMUST00000191634 999 ntBASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Trav6-3Q5R1E6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms