Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps13aQ5H8C4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps13aQ5H8C4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps13aQ5H8C4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps13aQ5H8C4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps13aQ5H8C4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.8■□□□□ 0.28
Vps13aQ5H8C4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Vps13aQ5H8C4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps13aQ5H8C4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps13aQ5H8C4 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.8■□□□□ 0.28
Vps13aQ5H8C4 Mir3113-201ENSMUST00000175478 76 ntBASIC16.8■□□□□ 0.28
Vps13aQ5H8C4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Vps13aQ5H8C4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps13aQ5H8C4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps13aQ5H8C4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Gm27628-201ENSMUST00000184911 107 ntBASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps13aQ5H8C4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Gm13418-201ENSMUST00000119097 944 ntBASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 AA543401-201ENSMUST00000164248 1269 ntBASIC16.78■□□□□ 0.28
Vps13aQ5H8C4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps13aQ5H8C4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps13aQ5H8C4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.77■□□□□ 0.28
Vps13aQ5H8C4 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.77■□□□□ 0.28
Vps13aQ5H8C4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps13aQ5H8C4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Vps13aQ5H8C4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps13aQ5H8C4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps13aQ5H8C4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.77■□□□□ 0.28
Vps13aQ5H8C4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Vps13aQ5H8C4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.77■□□□□ 0.28
Vps13aQ5H8C4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps13aQ5H8C4 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Vps13aQ5H8C4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps13aQ5H8C4 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Vps13aQ5H8C4 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Vps13aQ5H8C4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Vps13aQ5H8C4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Vps13aQ5H8C4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps13aQ5H8C4 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps13aQ5H8C4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps13aQ5H8C4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Vps13aQ5H8C4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps13aQ5H8C4 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps13aQ5H8C4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Vps13aQ5H8C4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps13aQ5H8C4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.76■□□□□ 0.27
Vps13aQ5H8C4 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.76■□□□□ 0.27
Vps13aQ5H8C4 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps13aQ5H8C4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps13aQ5H8C4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps13aQ5H8C4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps13aQ5H8C4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps13aQ5H8C4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps13aQ5H8C4 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps13aQ5H8C4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Vps13aQ5H8C4 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Vps13aQ5H8C4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms