Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Spg11Q3UHA3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Spg11Q3UHA3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Spg11Q3UHA3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Gm44430-201ENSMUST00000203376 995 ntBASIC15.61■□□□□ 0.09
Spg11Q3UHA3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Spg11Q3UHA3 Gm13823-201ENSMUST00000119930 345 ntBASIC15.6■□□□□ 0.09
Spg11Q3UHA3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Spg11Q3UHA3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Golph3-202ENSMUST00000226517 2359 ntBASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Gm44335-201ENSMUST00000196879 141 ntBASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Gm44297-201ENSMUST00000198304 141 ntBASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Gm44346-201ENSMUST00000198851 141 ntBASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Tgds-204ENSMUST00000228543 1594 ntBASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Spg11Q3UHA3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Spg11Q3UHA3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.09
Spg11Q3UHA3 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
Spg11Q3UHA3 Gm18421-201ENSMUST00000204122 625 ntBASIC15.58■□□□□ 0.09
Spg11Q3UHA3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Spg11Q3UHA3 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms