Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cul4aQ3TCH7 Gm12527-201ENSMUST00000117967 564 ntBASIC17.83■□□□□ 0.44
Cul4aQ3TCH7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cul4aQ3TCH7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cul4aQ3TCH7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cul4aQ3TCH7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Cul4aQ3TCH7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cul4aQ3TCH7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cul4aQ3TCH7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cul4aQ3TCH7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.8■□□□□ 0.44
Cul4aQ3TCH7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.8■□□□□ 0.44
Cul4aQ3TCH7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cul4aQ3TCH7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.8■□□□□ 0.44
Cul4aQ3TCH7 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.8■□□□□ 0.44
Cul4aQ3TCH7 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cul4aQ3TCH7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Cul4aQ3TCH7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cul4aQ3TCH7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cul4aQ3TCH7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Gm5643-201ENSMUST00000117081 966 ntBASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Trmt13-210ENSMUST00000198454 880 ntBASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Cul4aQ3TCH7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms