Protein–RNA interactions for Protein: Q3SXB8

Colec11, Collectin-11, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colec11Q3SXB8 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.2■□□□□ 0.34
Colec11Q3SXB8 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Colec11Q3SXB8 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.2■□□□□ 0.34
Colec11Q3SXB8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Gm13474-201ENSMUST00000122466 815 ntBASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.19■□□□□ 0.34
Colec11Q3SXB8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Colec11Q3SXB8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Colec11Q3SXB8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Colec11Q3SXB8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Colec11Q3SXB8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Colec11Q3SXB8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Colec11Q3SXB8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.15■□□□□ 0.34
Colec11Q3SXB8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Colec11Q3SXB8 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Colec11Q3SXB8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Colec11Q3SXB8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Colec11Q3SXB8 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Colec11Q3SXB8 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Colec11Q3SXB8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Colec11Q3SXB8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Colec11Q3SXB8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Colec11Q3SXB8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Colec11Q3SXB8 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.14■□□□□ 0.34
Colec11Q3SXB8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms