Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Gm38285-201ENSMUST00000192928 922 ntBASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Gm2559-201ENSMUST00000201323 363 ntBASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Zfp783-201ENSMUST00000095946 670 ntBASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ptchd3Q0EEE2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ptchd3Q0EEE2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Gm12896-201ENSMUST00000118430 226 ntBASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Gm11927-201ENSMUST00000118472 759 ntBASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ptchd3Q0EEE2 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.38■□□□□ 0.21
Ptchd3Q0EEE2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Gm12441-201ENSMUST00000121806 588 ntBASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms