Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Gm6912-201ENSMUST00000117218 544 ntBASIC15.18■□□□□ 0.02
Chd8Q09XV5 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd8Q09XV5 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.18■□□□□ 0.02
Chd8Q09XV5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Chd8Q09XV5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd8Q09XV5 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd8Q09XV5 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd8Q09XV5 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.17■□□□□ 0.02
Chd8Q09XV5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd8Q09XV5 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Chd8Q09XV5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd8Q09XV5 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd8Q09XV5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd8Q09XV5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd8Q09XV5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Chd8Q09XV5 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Chd8Q09XV5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC15.17■□□□□ 0.02
Chd8Q09XV5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Chd8Q09XV5 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Gm27430-201ENSMUST00000184585 107 ntBASIC15.16■□□□□ 0.02
Chd8Q09XV5 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.16■□□□□ 0.02
Chd8Q09XV5 Gm44333-201ENSMUST00000197168 107 ntBASIC15.16■□□□□ 0.02
Chd8Q09XV5 Gm9794-201ENSMUST00000202370 423 ntBASIC15.16■□□□□ 0.02
Chd8Q09XV5 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.16■□□□□ 0.02
Chd8Q09XV5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Chd8Q09XV5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.15■□□□□ 0.02
Chd8Q09XV5 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Mir7085-201ENSMUST00000184353 66 ntBASIC15.15■□□□□ 0.02
Chd8Q09XV5 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Chd8Q09XV5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chd8Q09XV5 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chd8Q09XV5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chd8Q09XV5 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.14■□□□□ 0.01
Chd8Q09XV5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chd8Q09XV5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.14■□□□□ 0.01
Chd8Q09XV5 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.14■□□□□ 0.01
Chd8Q09XV5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chd8Q09XV5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.14■□□□□ 0.01
Chd8Q09XV5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Chd8Q09XV5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chd8Q09XV5 Gm27622-201ENSMUST00000183779 60 ntBASIC15.14■□□□□ 0.01
Chd8Q09XV5 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Chd8Q09XV5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Chd8Q09XV5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chd8Q09XV5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Chd8Q09XV5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Chd8Q09XV5 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd8Q09XV5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Chd8Q09XV5 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.13■□□□□ 0.01
Chd8Q09XV5 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd8Q09XV5 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd8Q09XV5 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.13■□□□□ 0.01
Chd8Q09XV5 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chd8Q09XV5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.12■□□□□ 0.01
Chd8Q09XV5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chd8Q09XV5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms