Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.66■□□□□ 0.26
Sox4Q06831 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.66■□□□□ 0.26
Sox4Q06831 Gm22697-201ENSMUST00000175194 63 ntBASIC16.66■□□□□ 0.26
Sox4Q06831 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.66■□□□□ 0.26
Sox4Q06831 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.66■□□□□ 0.26
Sox4Q06831 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Gm10566-201ENSMUST00000086739 996 ntBASIC16.66■□□□□ 0.26
Sox4Q06831 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Sox4Q06831 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.65■□□□□ 0.26
Sox4Q06831 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.65■□□□□ 0.26
Sox4Q06831 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.65■□□□□ 0.26
Sox4Q06831 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Sox4Q06831 Gm18101-201ENSMUST00000215769 548 ntBASIC16.65■□□□□ 0.26
Sox4Q06831 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Sox4Q06831 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.65■□□□□ 0.26
Sox4Q06831 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.65■□□□□ 0.26
Sox4Q06831 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.65■□□□□ 0.26
Sox4Q06831 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.65■□□□□ 0.26
Sox4Q06831 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Sox4Q06831 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.64■□□□□ 0.25
Sox4Q06831 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.64■□□□□ 0.25
Sox4Q06831 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Sox4Q06831 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Sox4Q06831 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Sox4Q06831 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sox4Q06831 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.63■□□□□ 0.25
Sox4Q06831 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Sox4Q06831 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.63■□□□□ 0.25
Sox4Q06831 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Sox4Q06831 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Sox4Q06831 Mir1668-201ENSMUST00000184114 107 ntBASIC16.63■□□□□ 0.25
Sox4Q06831 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.63■□□□□ 0.25
Sox4Q06831 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Sox4Q06831 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox4Q06831 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sox4Q06831 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox4Q06831 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox4Q06831 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox4Q06831 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Sox4Q06831 Gm10013-201ENSMUST00000106074 672 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms