Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Col9a1Q05722 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Col9a1Q05722 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Col9a1Q05722 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Col9a1Q05722 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col9a1Q05722 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Col9a1Q05722 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col9a1Q05722 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col9a1Q05722 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.62■□□□□ 0.25
Col9a1Q05722 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.62■□□□□ 0.25
Col9a1Q05722 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.62■□□□□ 0.25
Col9a1Q05722 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col9a1Q05722 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.62■□□□□ 0.25
Col9a1Q05722 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col9a1Q05722 Mir6420-201ENSMUST00000185032 102 ntBASIC16.62■□□□□ 0.25
Col9a1Q05722 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col9a1Q05722 Gm43433-201ENSMUST00000196573 481 ntBASIC16.62■□□□□ 0.25
Col9a1Q05722 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Col9a1Q05722 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col9a1Q05722 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col9a1Q05722 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Col9a1Q05722 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col9a1Q05722 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col9a1Q05722 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Col9a1Q05722 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col9a1Q05722 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col9a1Q05722 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col9a1Q05722 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Col9a1Q05722 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col9a1Q05722 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.61■□□□□ 0.25
Col9a1Q05722 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.61■□□□□ 0.25
Col9a1Q05722 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.61■□□□□ 0.25
Col9a1Q05722 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col9a1Q05722 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col9a1Q05722 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col9a1Q05722 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col9a1Q05722 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Col9a1Q05722 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.61■□□□□ 0.25
Col9a1Q05722 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Col9a1Q05722 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col9a1Q05722 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Col9a1Q05722 Gm17271-201ENSMUST00000165535 355 ntBASIC16.6■□□□□ 0.25
Col9a1Q05722 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Col9a1Q05722 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Col9a1Q05722 Gm27437-201ENSMUST00000183429 107 ntBASIC16.6■□□□□ 0.25
Col9a1Q05722 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.6■□□□□ 0.25
Col9a1Q05722 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Col9a1Q05722 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.6■□□□□ 0.25
Col9a1Q05722 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Col9a1Q05722 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Col9a1Q05722 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Col9a1Q05722 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Col9a1Q05722 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col9a1Q05722 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Col9a1Q05722 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col9a1Q05722 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Col9a1Q05722 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col9a1Q05722 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.59■□□□□ 0.25
Col9a1Q05722 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.59■□□□□ 0.25
Col9a1Q05722 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.59■□□□□ 0.25
Col9a1Q05722 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.59■□□□□ 0.25
Col9a1Q05722 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Col9a1Q05722 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Col9a1Q05722 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Col9a1Q05722 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.58■□□□□ 0.24
Col9a1Q05722 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col9a1Q05722 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col9a1Q05722 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col9a1Q05722 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col9a1Q05722 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.58■□□□□ 0.24
Col9a1Q05722 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.58■□□□□ 0.24
Col9a1Q05722 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Col9a1Q05722 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Col9a1Q05722 Gm7856-201ENSMUST00000117514 1493 ntBASIC16.58■□□□□ 0.24
Col9a1Q05722 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col9a1Q05722 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col9a1Q05722 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col9a1Q05722 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Col9a1Q05722 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Col9a1Q05722 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col9a1Q05722 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Col9a1Q05722 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col9a1Q05722 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.57■□□□□ 0.24
Col9a1Q05722 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Col9a1Q05722 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.57■□□□□ 0.24
Col9a1Q05722 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms