Protein–RNA interactions for Protein: Q03404

Tff2, Trefoil factor 2, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff2Q03404 Gm44450-201ENSMUST00000199528 114 ntBASIC18.67■□□□□ 0.58
Tff2Q03404 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.67■□□□□ 0.58
Tff2Q03404 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tff2Q03404 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tff2Q03404 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tff2Q03404 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Tff2Q03404 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tff2Q03404 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tff2Q03404 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tff2Q03404 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tff2Q03404 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tff2Q03404 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Tff2Q03404 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tff2Q03404 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tff2Q03404 Gm12644-201ENSMUST00000119935 606 ntBASIC18.66■□□□□ 0.58
Tff2Q03404 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.66■□□□□ 0.58
Tff2Q03404 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Tff2Q03404 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tff2Q03404 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tff2Q03404 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tff2Q03404 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tff2Q03404 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tff2Q03404 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.65■□□□□ 0.58
Tff2Q03404 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.65■□□□□ 0.58
Tff2Q03404 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tff2Q03404 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.65■□□□□ 0.58
Tff2Q03404 Gm18206-201ENSMUST00000207027 926 ntBASIC18.65■□□□□ 0.58
Tff2Q03404 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Tff2Q03404 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.65■□□□□ 0.58
Tff2Q03404 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tff2Q03404 Gm37194-201ENSMUST00000193092 3031 ntBASIC18.65■□□□□ 0.58
Tff2Q03404 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tff2Q03404 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tff2Q03404 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tff2Q03404 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Tff2Q03404 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tff2Q03404 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tff2Q03404 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tff2Q03404 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tff2Q03404 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tff2Q03404 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.64■□□□□ 0.57
Tff2Q03404 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.64■□□□□ 0.57
Tff2Q03404 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.64■□□□□ 0.57
Tff2Q03404 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tff2Q03404 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.64■□□□□ 0.57
Tff2Q03404 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tff2Q03404 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Tff2Q03404 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tff2Q03404 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.64■□□□□ 0.57
Tff2Q03404 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tff2Q03404 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tff2Q03404 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tff2Q03404 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.63■□□□□ 0.57
Tff2Q03404 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tff2Q03404 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tff2Q03404 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
Tff2Q03404 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tff2Q03404 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tff2Q03404 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tff2Q03404 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tff2Q03404 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.63■□□□□ 0.57
Tff2Q03404 Gm18195-201ENSMUST00000207604 706 ntBASIC18.63■□□□□ 0.57
Tff2Q03404 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.63■□□□□ 0.57
Tff2Q03404 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.63■□□□□ 0.57
Tff2Q03404 Gm6296-201ENSMUST00000222599 943 ntBASIC18.63■□□□□ 0.57
Tff2Q03404 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tff2Q03404 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tff2Q03404 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tff2Q03404 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tff2Q03404 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tff2Q03404 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tff2Q03404 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tff2Q03404 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tff2Q03404 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tff2Q03404 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tff2Q03404 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tff2Q03404 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tff2Q03404 Gm2651-201ENSMUST00000203560 838 ntBASIC18.62■□□□□ 0.57
Tff2Q03404 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.62■□□□□ 0.57
Tff2Q03404 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.62■□□□□ 0.57
Tff2Q03404 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.62■□□□□ 0.57
Tff2Q03404 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.62■□□□□ 0.57
Tff2Q03404 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tff2Q03404 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tff2Q03404 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tff2Q03404 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tff2Q03404 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tff2Q03404 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tff2Q03404 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tff2Q03404 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tff2Q03404 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tff2Q03404 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Tff2Q03404 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tff2Q03404 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tff2Q03404 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tff2Q03404 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tff2Q03404 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.61■□□□□ 0.57
Tff2Q03404 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC18.61■□□□□ 0.57
Tff2Q03404 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.61■□□□□ 0.57
Tff2Q03404 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms