Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC21.19■□□□□ 0.98
Smarcc1P97496 AC160338.1-201ENSMUST00000214232 705 ntBASIC21.19■□□□□ 0.98
Smarcc1P97496 Gm6296-201ENSMUST00000222599 943 ntBASIC21.19■□□□□ 0.98
Smarcc1P97496 Vti1a-206ENSMUST00000225529 1244 ntBASIC21.19■□□□□ 0.98
Smarcc1P97496 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smarcc1P97496 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc1P97496 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Smarcc1P97496 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc1P97496 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc1P97496 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc1P97496 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc1P97496 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc1P97496 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC21.18■□□□□ 0.98
Smarcc1P97496 Gm7862-201ENSMUST00000121461 292 ntBASIC21.18■□□□□ 0.98
Smarcc1P97496 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC21.18■□□□□ 0.98
Smarcc1P97496 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC21.18■□□□□ 0.98
Smarcc1P97496 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc1P97496 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc1P97496 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc1P97496 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC21.18■□□□□ 0.98
Smarcc1P97496 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Smarcc1P97496 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC21.18■□□□□ 0.98
Smarcc1P97496 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smarcc1P97496 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Smarcc1P97496 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcc1P97496 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcc1P97496 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcc1P97496 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcc1P97496 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcc1P97496 Gm1401-201ENSMUST00000122048 772 ntBASIC21.17■□□□□ 0.98
Smarcc1P97496 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Smarcc1P97496 Mir5131-201ENSMUST00000175426 93 ntBASIC21.17■□□□□ 0.98
Smarcc1P97496 Gm18421-201ENSMUST00000204122 625 ntBASIC21.17■□□□□ 0.98
Smarcc1P97496 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcc1P97496 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcc1P97496 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC21.17■□□□□ 0.98
Smarcc1P97496 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smarcc1P97496 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
Smarcc1P97496 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Smarcc1P97496 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcc1P97496 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcc1P97496 Gm27867-201ENSMUST00000184778 125 ntBASIC21.16■□□□□ 0.98
Smarcc1P97496 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC21.16■□□□□ 0.98
Smarcc1P97496 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC21.16■□□□□ 0.98
Smarcc1P97496 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcc1P97496 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcc1P97496 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC21.16■□□□□ 0.98
Smarcc1P97496 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Smarcc1P97496 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcc1P97496 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Smarcc1P97496 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smarcc1P97496 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc1P97496 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc1P97496 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smarcc1P97496 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smarcc1P97496 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smarcc1P97496 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc1P97496 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC21.15■□□□□ 0.98
Smarcc1P97496 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc1P97496 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc1P97496 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smarcc1P97496 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smarcc1P97496 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smarcc1P97496 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smarcc1P97496 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smarcc1P97496 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smarcc1P97496 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smarcc1P97496 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc1P97496 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC21.14■□□□□ 0.97
Smarcc1P97496 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC21.14■□□□□ 0.97
Smarcc1P97496 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC21.14■□□□□ 0.97
Smarcc1P97496 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc1P97496 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc1P97496 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc1P97496 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc1P97496 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc1P97496 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc1P97496 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc1P97496 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc1P97496 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc1P97496 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smarcc1P97496 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcc1P97496 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Smarcc1P97496 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Smarcc1P97496 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcc1P97496 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.13■□□□□ 0.97
Smarcc1P97496 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcc1P97496 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcc1P97496 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcc1P97496 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC21.13■□□□□ 0.97
Smarcc1P97496 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC21.13■□□□□ 0.97
Smarcc1P97496 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcc1P97496 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smarcc1P97496 AC125311.2-201ENSMUST00000227477 1940 ntBASIC21.12■□□□□ 0.97
Smarcc1P97496 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC21.12■□□□□ 0.97
Smarcc1P97496 Gm15165-201ENSMUST00000118140 502 ntBASIC21.12■□□□□ 0.97
Smarcc1P97496 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smarcc1P97496 Gm44357-201ENSMUST00000195897 142 ntBASIC21.12■□□□□ 0.97
Smarcc1P97496 Gm19658-201ENSMUST00000196231 138 ntBASIC21.12■□□□□ 0.97
Smarcc1P97496 Gm44367-201ENSMUST00000196836 138 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms