Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43cP86449 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43cP86449 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.44■□□□□ 0.54
Trim43cP86449 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43cP86449 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Trim43cP86449 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43cP86449 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim43cP86449 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trim43cP86449 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43cP86449 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43cP86449 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.44■□□□□ 0.54
Trim43cP86449 Gm43799-201ENSMUST00000201845 579 ntBASIC18.44■□□□□ 0.54
Trim43cP86449 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
Trim43cP86449 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43cP86449 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43cP86449 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43cP86449 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43cP86449 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43cP86449 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trim43cP86449 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43cP86449 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trim43cP86449 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43cP86449 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43cP86449 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43cP86449 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43cP86449 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43cP86449 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43cP86449 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.43■□□□□ 0.54
Trim43cP86449 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.43■□□□□ 0.54
Trim43cP86449 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC18.43■□□□□ 0.54
Trim43cP86449 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.43■□□□□ 0.54
Trim43cP86449 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43cP86449 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trim43cP86449 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43cP86449 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trim43cP86449 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Trim43cP86449 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.43■□□□□ 0.54
Trim43cP86449 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43cP86449 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43cP86449 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43cP86449 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43cP86449 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43cP86449 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.42■□□□□ 0.54
Trim43cP86449 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.42■□□□□ 0.54
Trim43cP86449 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.42■□□□□ 0.54
Trim43cP86449 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43cP86449 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Trim43cP86449 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43cP86449 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43cP86449 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Trim43cP86449 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43cP86449 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.42■□□□□ 0.54
Trim43cP86449 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43cP86449 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Trim43cP86449 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43cP86449 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trim43cP86449 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Gm8668-201ENSMUST00000120559 1447 ntBASIC18.41■□□□□ 0.54
Trim43cP86449 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Gm13216-201ENSMUST00000117145 591 ntBASIC18.41■□□□□ 0.54
Trim43cP86449 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim43cP86449 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.41■□□□□ 0.54
Trim43cP86449 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.41■□□□□ 0.54
Trim43cP86449 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim43cP86449 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43cP86449 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43cP86449 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43cP86449 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.4■□□□□ 0.54
Trim43cP86449 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.4■□□□□ 0.54
Trim43cP86449 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim43cP86449 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43cP86449 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43cP86449 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim43cP86449 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trim43cP86449 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim43cP86449 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43cP86449 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43cP86449 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43cP86449 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43cP86449 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43cP86449 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.39■□□□□ 0.53
Trim43cP86449 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim43cP86449 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.39■□□□□ 0.53
Trim43cP86449 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.39■□□□□ 0.53
Trim43cP86449 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.39■□□□□ 0.53
Trim43cP86449 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.39■□□□□ 0.53
Trim43cP86449 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms