Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfn1P62962 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Pfn1P62962 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.21□□□□□ -0.29
Pfn1P62962 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfn1P62962 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Pfn1P62962 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfn1P62962 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Pfn1P62962 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pfn1P62962 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Pfn1P62962 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfn1P62962 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.21□□□□□ -0.3
Pfn1P62962 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfn1P62962 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Pfn1P62962 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Pfn1P62962 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Pfn1P62962 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Pfn1P62962 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Pfn1P62962 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.2□□□□□ -0.3
Pfn1P62962 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.2□□□□□ -0.3
Pfn1P62962 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.2□□□□□ -0.3
Pfn1P62962 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Pfn1P62962 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Pfn1P62962 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Pfn1P62962 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pfn1P62962 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Pfn1P62962 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.19□□□□□ -0.3
Pfn1P62962 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Pfn1P62962 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pfn1P62962 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pfn1P62962 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pfn1P62962 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pfn1P62962 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Pfn1P62962 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.18□□□□□ -0.3
Pfn1P62962 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pfn1P62962 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Mir8112-201ENSMUST00000184382 131 ntBASIC13.18□□□□□ -0.3
Pfn1P62962 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.18□□□□□ -0.3
Pfn1P62962 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Pfn1P62962 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Pfn1P62962 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.18□□□□□ -0.3
Pfn1P62962 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.18□□□□□ -0.3
Pfn1P62962 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms