Protein–RNA interactions for Protein: P50586

Tub, Tubby protein, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TubP50586 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TubP50586 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.39■□□□□ 0.37
TubP50586 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.39■□□□□ 0.37
TubP50586 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TubP50586 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TubP50586 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.39■□□□□ 0.37
TubP50586 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TubP50586 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TubP50586 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TubP50586 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TubP50586 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TubP50586 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TubP50586 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TubP50586 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TubP50586 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TubP50586 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TubP50586 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TubP50586 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.38■□□□□ 0.37
TubP50586 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.38■□□□□ 0.37
TubP50586 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.38■□□□□ 0.37
TubP50586 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TubP50586 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TubP50586 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 Gm10231-201ENSMUST00000181584 441 ntBASIC17.37■□□□□ 0.37
TubP50586 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.37■□□□□ 0.37
TubP50586 Gm10175-202ENSMUST00000208752 441 ntBASIC17.37■□□□□ 0.37
TubP50586 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TubP50586 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.37■□□□□ 0.37
TubP50586 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TubP50586 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TubP50586 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.36■□□□□ 0.37
TubP50586 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TubP50586 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TubP50586 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TubP50586 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TubP50586 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TubP50586 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.36■□□□□ 0.37
TubP50586 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TubP50586 Gm13836-201ENSMUST00000121159 501 ntBASIC17.36■□□□□ 0.37
TubP50586 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.36■□□□□ 0.37
TubP50586 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TubP50586 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TubP50586 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TubP50586 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TubP50586 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TubP50586 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.36■□□□□ 0.37
TubP50586 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.36■□□□□ 0.37
TubP50586 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TubP50586 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.35■□□□□ 0.37
TubP50586 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TubP50586 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.35■□□□□ 0.37
TubP50586 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.35■□□□□ 0.37
TubP50586 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TubP50586 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
TubP50586 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TubP50586 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TubP50586 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TubP50586 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms