Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Brca1P48754 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Brca1P48754 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Brca1P48754 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Brca1P48754 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Brca1P48754 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Brca1P48754 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
Brca1P48754 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Brca1P48754 Auts2-212ENSMUST00000178555 309 ntBASIC19.04■□□□□ 0.64
Brca1P48754 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.04■□□□□ 0.64
Brca1P48754 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Brca1P48754 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Brca1P48754 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Brca1P48754 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Brca1P48754 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Brca1P48754 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Brca1P48754 Gm25990-201ENSMUST00000102440 86 ntBASIC19.04■□□□□ 0.64
Brca1P48754 Gm14494-201ENSMUST00000118786 435 ntBASIC19.04■□□□□ 0.64
Brca1P48754 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC19.04■□□□□ 0.64
Brca1P48754 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Brca1P48754 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Brca1P48754 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Brca1P48754 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Brca1P48754 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Brca1P48754 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
Brca1P48754 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.03■□□□□ 0.64
Brca1P48754 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Brca1P48754 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 Grk6-206ENSMUST00000224995 2971 ntBASIC19.03■□□□□ 0.64
Brca1P48754 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Brca1P48754 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Brca1P48754 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Brca1P48754 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Brca1P48754 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Brca1P48754 Gm10576-201ENSMUST00000191927 825 ntBASIC19.02■□□□□ 0.64
Brca1P48754 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Brca1P48754 CT943659.1-201ENSMUST00000215459 326 ntBASIC19.02■□□□□ 0.64
Brca1P48754 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.02■□□□□ 0.64
Brca1P48754 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC19.02■□□□□ 0.64
Brca1P48754 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Brca1P48754 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Brca1P48754 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.02■□□□□ 0.64
Brca1P48754 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Brca1P48754 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
Brca1P48754 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Brca1P48754 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Brca1P48754 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Brca1P48754 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Brca1P48754 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Brca1P48754 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Brca1P48754 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca1P48754 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca1P48754 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.01■□□□□ 0.63
Brca1P48754 Gm14140-201ENSMUST00000119999 995 ntBASIC19.01■□□□□ 0.63
Brca1P48754 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca1P48754 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Brca1P48754 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca1P48754 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca1P48754 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Brca1P48754 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Brca1P48754 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Brca1P48754 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca1P48754 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca1P48754 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Brca1P48754 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Brca1P48754 Gm14822-201ENSMUST00000122247 291 ntBASIC19■□□□□ 0.63
Brca1P48754 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC19■□□□□ 0.63
Brca1P48754 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC19■□□□□ 0.63
Brca1P48754 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Brca1P48754 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Brca1P48754 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Brca1P48754 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Brca1P48754 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC19■□□□□ 0.63
Brca1P48754 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Brca1P48754 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC19■□□□□ 0.63
Brca1P48754 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Brca1P48754 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19■□□□□ 0.63
Brca1P48754 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Brca1P48754 Gm24513-201ENSMUST00000174964 138 ntBASIC19■□□□□ 0.63
Brca1P48754 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC19■□□□□ 0.63
Brca1P48754 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19■□□□□ 0.63
Brca1P48754 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Brca1P48754 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Brca1P48754 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Brca1P48754 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.99■□□□□ 0.63
Brca1P48754 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms