Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.33■□□□□ 0.04
Rfx3P48381 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.33■□□□□ 0.04
Rfx3P48381 Gm37856-201ENSMUST00000191634 999 ntBASIC15.33■□□□□ 0.04
Rfx3P48381 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.33■□□□□ 0.04
Rfx3P48381 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rfx3P48381 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.33■□□□□ 0.04
Rfx3P48381 Gm18025-201ENSMUST00000221733 862 ntBASIC15.33■□□□□ 0.04
Rfx3P48381 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rfx3P48381 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.33■□□□□ 0.04
Rfx3P48381 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.33■□□□□ 0.04
Rfx3P48381 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rfx3P48381 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.32■□□□□ 0.04
Rfx3P48381 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rfx3P48381 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.32■□□□□ 0.04
Rfx3P48381 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Rfx3P48381 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Gm12527-201ENSMUST00000117967 564 ntBASIC15.32■□□□□ 0.04
Rfx3P48381 H2-K2-201ENSMUST00000174250 1049 ntBASIC15.32■□□□□ 0.04
Rfx3P48381 Gm42545-201ENSMUST00000202755 922 ntBASIC15.32■□□□□ 0.04
Rfx3P48381 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rfx3P48381 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rfx3P48381 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Nrn1-203ENSMUST00000223611 1443 ntBASIC15.32■□□□□ 0.04
Rfx3P48381 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rfx3P48381 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Rfx3P48381 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.31■□□□□ 0.04
Rfx3P48381 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rfx3P48381 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Rfx3P48381 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Gm20760-201ENSMUST00000179197 648 ntBASIC15.31■□□□□ 0.04
Rfx3P48381 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.31■□□□□ 0.04
Rfx3P48381 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.31■□□□□ 0.04
Rfx3P48381 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.31■□□□□ 0.04
Rfx3P48381 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rfx3P48381 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC15.3■□□□□ 0.04
Rfx3P48381 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rfx3P48381 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.3■□□□□ 0.04
Rfx3P48381 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms