Protein–RNA interactions for Protein: P43027

Gdf5, Growth/differentiation factor 5, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf5P43027 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gdf5P43027 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gdf5P43027 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Gdf5P43027 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gdf5P43027 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gdf5P43027 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gdf5P43027 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.1■□□□□ 0.33
Gdf5P43027 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gdf5P43027 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.1■□□□□ 0.33
Gdf5P43027 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.1■□□□□ 0.33
Gdf5P43027 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gdf5P43027 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gdf5P43027 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.1■□□□□ 0.33
Gdf5P43027 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gdf5P43027 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gdf5P43027 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gdf5P43027 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.1■□□□□ 0.33
Gdf5P43027 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gdf5P43027 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gdf5P43027 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gdf5P43027 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.09■□□□□ 0.33
Gdf5P43027 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gdf5P43027 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.09■□□□□ 0.33
Gdf5P43027 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gdf5P43027 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.09■□□□□ 0.33
Gdf5P43027 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Gdf5P43027 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gdf5P43027 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gdf5P43027 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gdf5P43027 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Gdf5P43027 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Gdf5P43027 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.09■□□□□ 0.33
Gdf5P43027 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gdf5P43027 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gdf5P43027 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gdf5P43027 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gdf5P43027 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.08■□□□□ 0.33
Gdf5P43027 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Gdf5P43027 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gdf5P43027 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Gdf5P43027 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gdf5P43027 Gm22697-201ENSMUST00000175194 63 ntBASIC17.08■□□□□ 0.32
Gdf5P43027 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gdf5P43027 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gdf5P43027 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gdf5P43027 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gdf5P43027 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gdf5P43027 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.07■□□□□ 0.32
Gdf5P43027 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.07■□□□□ 0.32
Gdf5P43027 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Gdf5P43027 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Gdf5P43027 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.07■□□□□ 0.32
Gdf5P43027 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.07■□□□□ 0.32
Gdf5P43027 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Gdf5P43027 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gdf5P43027 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gdf5P43027 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Gdf5P43027 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Gdf5P43027 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.06■□□□□ 0.32
Gdf5P43027 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gdf5P43027 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
Gdf5P43027 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.05■□□□□ 0.32
Gdf5P43027 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gdf5P43027 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Gdf5P43027 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.05■□□□□ 0.32
Gdf5P43027 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms