Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Gm11643-201ENSMUST00000119578 864 ntBASIC17.36■□□□□ 0.37
Mmp13P33435 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.36■□□□□ 0.37
Mmp13P33435 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.36■□□□□ 0.37
Mmp13P33435 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.36■□□□□ 0.37
Mmp13P33435 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.36■□□□□ 0.37
Mmp13P33435 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Mmp13P33435 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Mmp13P33435 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Mmp13P33435 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.35■□□□□ 0.37
Mmp13P33435 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Mmp13P33435 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Gm12382-201ENSMUST00000122005 922 ntBASIC17.35■□□□□ 0.37
Mmp13P33435 Gm43183-201ENSMUST00000200632 547 ntBASIC17.35■□□□□ 0.37
Mmp13P33435 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Mmp13P33435 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.34■□□□□ 0.37
Mmp13P33435 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mmp13P33435 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.34■□□□□ 0.37
Mmp13P33435 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mmp13P33435 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp13P33435 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp13P33435 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp13P33435 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp13P33435 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp13P33435 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp13P33435 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Mmp13P33435 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Mmp13P33435 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Mmp13P33435 Mir1199-201ENSMUST00000117015 119 ntBASIC17.33■□□□□ 0.36
Mmp13P33435 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.33■□□□□ 0.36
Mmp13P33435 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.33■□□□□ 0.36
Mmp13P33435 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.33■□□□□ 0.36
Mmp13P33435 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.32■□□□□ 0.36
Mmp13P33435 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.32■□□□□ 0.36
Mmp13P33435 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.32■□□□□ 0.36
Mmp13P33435 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Mmp13P33435 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Mmp13P33435 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Mmp13P33435 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Mmp13P33435 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Mmp13P33435 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mmp13P33435 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.31■□□□□ 0.36
Mmp13P33435 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.31■□□□□ 0.36
Mmp13P33435 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Mmp13P33435 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms