Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Gm11643-201ENSMUST00000119578 864 ntBASIC17.36■□□□□ 0.37
Mmp13P33435 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.36■□□□□ 0.37
Mmp13P33435 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.36■□□□□ 0.37
Mmp13P33435 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC17.36■□□□□ 0.37
Mmp13P33435 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.36■□□□□ 0.37
Mmp13P33435 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Mmp13P33435 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Mmp13P33435 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Mmp13P33435 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Mmp13P33435 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.35■□□□□ 0.37
Mmp13P33435 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Mmp13P33435 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Gm12382-201ENSMUST00000122005 922 ntBASIC17.35■□□□□ 0.37
Mmp13P33435 Gm43183-201ENSMUST00000200632 547 ntBASIC17.35■□□□□ 0.37
Mmp13P33435 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Mmp13P33435 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Mmp13P33435 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.34■□□□□ 0.37
Mmp13P33435 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mmp13P33435 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.34■□□□□ 0.37
Mmp13P33435 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Mmp13P33435 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Mmp13P33435 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp13P33435 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp13P33435 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp13P33435 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp13P33435 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp13P33435 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Mmp13P33435 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Mmp13P33435 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Mmp13P33435 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Mmp13P33435 Mir1199-201ENSMUST00000117015 119 ntBASIC17.33■□□□□ 0.36
Mmp13P33435 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.33■□□□□ 0.36
Mmp13P33435 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.33■□□□□ 0.36
Mmp13P33435 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.33■□□□□ 0.36
Mmp13P33435 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Mmp13P33435 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.32■□□□□ 0.36
Mmp13P33435 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.32■□□□□ 0.36
Mmp13P33435 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.32■□□□□ 0.36
Mmp13P33435 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Mmp13P33435 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Mmp13P33435 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Mmp13P33435 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Mmp13P33435 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Mmp13P33435 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Mmp13P33435 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Mmp13P33435 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Mmp13P33435 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.31■□□□□ 0.36
Mmp13P33435 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.31■□□□□ 0.36
Mmp13P33435 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Mmp13P33435 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms