Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pde6bP23440 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6bP23440 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6bP23440 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6bP23440 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6bP23440 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6bP23440 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Pde6bP23440 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6bP23440 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Pde6bP23440 Gm11950-201ENSMUST00000121615 838 ntBASIC18.46■□□□□ 0.55
Pde6bP23440 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6bP23440 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.46■□□□□ 0.55
Pde6bP23440 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6bP23440 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6bP23440 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6bP23440 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6bP23440 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Pde6bP23440 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Gm18958-201ENSMUST00000174258 762 ntBASIC18.45■□□□□ 0.54
Pde6bP23440 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.45■□□□□ 0.54
Pde6bP23440 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Pde6bP23440 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Pde6bP23440 Actl10-202ENSMUST00000226583 1501 ntBASIC18.44■□□□□ 0.54
Pde6bP23440 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.44■□□□□ 0.54
Pde6bP23440 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.44■□□□□ 0.54
Pde6bP23440 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Gm17971-201ENSMUST00000190239 806 ntBASIC18.44■□□□□ 0.54
Pde6bP23440 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
Pde6bP23440 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC18.44■□□□□ 0.54
Pde6bP23440 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pde6bP23440 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.43■□□□□ 0.54
Pde6bP23440 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Pde6bP23440 Gm6623-201ENSMUST00000173570 544 ntBASIC18.43■□□□□ 0.54
Pde6bP23440 Mir8112-201ENSMUST00000184382 131 ntBASIC18.43■□□□□ 0.54
Pde6bP23440 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.43■□□□□ 0.54
Pde6bP23440 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Pde6bP23440 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6bP23440 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
Pde6bP23440 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pde6bP23440 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pde6bP23440 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6bP23440 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6bP23440 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Pde6bP23440 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.42■□□□□ 0.54
Pde6bP23440 Gm28033-201ENSMUST00000184224 96 ntBASIC18.42■□□□□ 0.54
Pde6bP23440 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.42■□□□□ 0.54
Pde6bP23440 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Pde6bP23440 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6bP23440 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pde6bP23440 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6bP23440 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Pde6bP23440 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Pde6bP23440 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6bP23440 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6bP23440 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Pde6bP23440 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pde6bP23440 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pde6bP23440 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms