Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rb1P13405 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rb1P13405 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Rb1P13405 Gm14859-201ENSMUST00000117752 357 ntBASIC17.32■□□□□ 0.36
Rb1P13405 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 Gm4974-201ENSMUST00000209974 875 ntBASIC17.32■□□□□ 0.36
Rb1P13405 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rb1P13405 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rb1P13405 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
Rb1P13405 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rb1P13405 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Rb1P13405 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rb1P13405 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rb1P13405 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.31■□□□□ 0.36
Rb1P13405 Gm16061-201ENSMUST00000122167 857 ntBASIC17.31■□□□□ 0.36
Rb1P13405 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rb1P13405 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rb1P13405 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rb1P13405 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rb1P13405 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rb1P13405 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rb1P13405 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rb1P13405 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rb1P13405 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.31■□□□□ 0.36
Rb1P13405 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rb1P13405 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.31■□□□□ 0.36
Rb1P13405 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Rb1P13405 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rb1P13405 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.3■□□□□ 0.36
Rb1P13405 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.3■□□□□ 0.36
Rb1P13405 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rb1P13405 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Rb1P13405 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.29■□□□□ 0.36
Rb1P13405 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rb1P13405 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Gm13474-201ENSMUST00000122466 815 ntBASIC17.29■□□□□ 0.36
Rb1P13405 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.29■□□□□ 0.36
Rb1P13405 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.29■□□□□ 0.36
Rb1P13405 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.29■□□□□ 0.36
Rb1P13405 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.29■□□□□ 0.36
Rb1P13405 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rb1P13405 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rb1P13405 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rb1P13405 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.28■□□□□ 0.36
Rb1P13405 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rb1P13405 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms