Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ly6c1P0CW02 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ly6c1P0CW02 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ly6c1P0CW02 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ly6c1P0CW02 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.16□□□□□ -0.14
Ly6c1P0CW02 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ly6c1P0CW02 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Ly6c1P0CW02 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Ly6c1P0CW02 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Ly6c1P0CW02 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.16□□□□□ -0.14
Ly6c1P0CW02 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ly6c1P0CW02 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Ly6c1P0CW02 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Gm18558-201ENSMUST00000186253 1214 ntBASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Gm7977-201ENSMUST00000193787 748 ntBASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Gm18101-201ENSMUST00000215769 548 ntBASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ly6c1P0CW02 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ly6c1P0CW02 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ly6c1P0CW02 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Gm6598-201ENSMUST00000202719 2615 ntBASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Mir1668-201ENSMUST00000184114 107 ntBASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ly6c1P0CW02 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Actl10-202ENSMUST00000226583 1501 ntBASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Gm10013-201ENSMUST00000106074 672 ntBASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.12□□□□□ -0.15
Ly6c1P0CW02 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms