Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.91■□□□□ 0.14
Sod1P08228 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.91■□□□□ 0.14
Sod1P08228 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sod1P08228 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.91■□□□□ 0.14
Sod1P08228 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.91■□□□□ 0.14
Sod1P08228 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 AW822252-206ENSMUST00000208904 237 ntBASIC15.91■□□□□ 0.14
Sod1P08228 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Sod1P08228 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Sod1P08228 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Sod1P08228 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.91■□□□□ 0.14
Sod1P08228 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Sod1P08228 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.9■□□□□ 0.14
Sod1P08228 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.9■□□□□ 0.14
Sod1P08228 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.9■□□□□ 0.14
Sod1P08228 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Gm44430-201ENSMUST00000203376 995 ntBASIC15.9■□□□□ 0.14
Sod1P08228 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.9■□□□□ 0.14
Sod1P08228 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Sod1P08228 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Sod1P08228 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sod1P08228 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sod1P08228 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sod1P08228 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sod1P08228 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Sod1P08228 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
Sod1P08228 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sod1P08228 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sod1P08228 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sod1P08228 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.89■□□□□ 0.13
Sod1P08228 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.89■□□□□ 0.13
Sod1P08228 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sod1P08228 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sod1P08228 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sod1P08228 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.89■□□□□ 0.13
Sod1P08228 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Sod1P08228 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Sod1P08228 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.89■□□□□ 0.13
Sod1P08228 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC15.89■□□□□ 0.13
Sod1P08228 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Sod1P08228 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Sod1P08228 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.88■□□□□ 0.13
Sod1P08228 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.88■□□□□ 0.13
Sod1P08228 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Sod1P08228 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC15.88■□□□□ 0.13
Sod1P08228 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.88■□□□□ 0.13
Sod1P08228 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 Rps4l-201ENSMUST00000071745 943 ntBASIC15.88■□□□□ 0.13
Sod1P08228 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Sod1P08228 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Sod1P08228 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Sod1P08228 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sod1P08228 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sod1P08228 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sod1P08228 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sod1P08228 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms