Protein–RNA interactions for Protein: P01804

Ig heavy chain V-III region HPC76 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01804 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
P01804 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01804 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
P01804 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.65□□□□□ -0.06
P01804 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01804 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.65□□□□□ -0.06
P01804 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
P01804 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
P01804 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.65□□□□□ -0.06
P01804 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
P01804 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
P01804 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
P01804 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
P01804 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.64□□□□□ -0.07
P01804 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
P01804 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
P01804 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
P01804 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.64□□□□□ -0.07
P01804 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
P01804 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
P01804 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
P01804 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.64□□□□□ -0.07
P01804 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
P01804 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.63□□□□□ -0.07
P01804 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
P01804 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
P01804 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
P01804 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.63□□□□□ -0.07
P01804 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.63□□□□□ -0.07
P01804 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
P01804 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.62□□□□□ -0.07
P01804 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Mir5130-201ENSMUST00000175160 84 ntBASIC14.62□□□□□ -0.07
P01804 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.62□□□□□ -0.07
P01804 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.62□□□□□ -0.07
P01804 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.62□□□□□ -0.07
P01804 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
P01804 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
P01804 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
P01804 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
P01804 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01804 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01804 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
P01804 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
P01804 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
P01804 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.61□□□□□ -0.07
P01804 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.61□□□□□ -0.07
P01804 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P01804 Gm45058-201ENSMUST00000205810 766 ntBASIC14.61□□□□□ -0.07
P01804 Gm9987-201ENSMUST00000069768 567 ntBASIC14.61□□□□□ -0.07
P01804 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
P01804 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms