Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vti1aO89116 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vti1aO89116 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
Vti1aO89116 Gm9731-201ENSMUST00000209480 747 ntBASIC18.3■□□□□ 0.52
Vti1aO89116 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Vti1aO89116 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vti1aO89116 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vti1aO89116 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vti1aO89116 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Vti1aO89116 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Vti1aO89116 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Vti1aO89116 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vti1aO89116 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.29■□□□□ 0.52
Vti1aO89116 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.29■□□□□ 0.52
Vti1aO89116 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vti1aO89116 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vti1aO89116 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.29■□□□□ 0.52
Vti1aO89116 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vti1aO89116 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vti1aO89116 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vti1aO89116 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Vti1aO89116 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.29■□□□□ 0.52
Vti1aO89116 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.29■□□□□ 0.52
Vti1aO89116 Gm27704-201ENSMUST00000185094 107 ntBASIC18.29■□□□□ 0.52
Vti1aO89116 Gm5587-201ENSMUST00000206270 674 ntBASIC18.29■□□□□ 0.52
Vti1aO89116 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Vti1aO89116 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vti1aO89116 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vti1aO89116 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.29■□□□□ 0.52
Vti1aO89116 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Vti1aO89116 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vti1aO89116 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Vti1aO89116 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vti1aO89116 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vti1aO89116 Gm9013-201ENSMUST00000132939 882 ntBASIC18.28■□□□□ 0.52
Vti1aO89116 Mir1668-201ENSMUST00000184114 107 ntBASIC18.28■□□□□ 0.52
Vti1aO89116 Mir8112-201ENSMUST00000184382 131 ntBASIC18.28■□□□□ 0.52
Vti1aO89116 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.28■□□□□ 0.52
Vti1aO89116 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.28■□□□□ 0.52
Vti1aO89116 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.28■□□□□ 0.52
Vti1aO89116 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vti1aO89116 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vti1aO89116 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.28■□□□□ 0.52
Vti1aO89116 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Vti1aO89116 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vti1aO89116 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vti1aO89116 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
Vti1aO89116 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Vti1aO89116 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.27■□□□□ 0.52
Vti1aO89116 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vti1aO89116 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Vti1aO89116 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Vti1aO89116 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vti1aO89116 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Vti1aO89116 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vti1aO89116 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vti1aO89116 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vti1aO89116 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Vti1aO89116 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vti1aO89116 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vti1aO89116 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vti1aO89116 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vti1aO89116 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Vti1aO89116 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.26■□□□□ 0.51
Vti1aO89116 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vti1aO89116 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vti1aO89116 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.26■□□□□ 0.51
Vti1aO89116 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vti1aO89116 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Vti1aO89116 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vti1aO89116 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Vti1aO89116 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vti1aO89116 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Vti1aO89116 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Vti1aO89116 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Vti1aO89116 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.25■□□□□ 0.51
Vti1aO89116 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.25■□□□□ 0.51
Vti1aO89116 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.25■□□□□ 0.51
Vti1aO89116 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.25■□□□□ 0.51
Vti1aO89116 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.25■□□□□ 0.51
Vti1aO89116 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Vti1aO89116 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Vti1aO89116 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.24■□□□□ 0.51
Vti1aO89116 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Vti1aO89116 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms