Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tgfbr3O88393 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tgfbr3O88393 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tgfbr3O88393 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tgfbr3O88393 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.09■□□□□ 0.17
Tgfbr3O88393 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.09■□□□□ 0.17
Tgfbr3O88393 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tgfbr3O88393 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Tgfbr3O88393 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.09■□□□□ 0.17
Tgfbr3O88393 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.09■□□□□ 0.17
Tgfbr3O88393 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tgfbr3O88393 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tgfbr3O88393 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Tgfbr3O88393 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.09■□□□□ 0.17
Tgfbr3O88393 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Tgfbr3O88393 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tgfbr3O88393 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
Tgfbr3O88393 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tgfbr3O88393 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Tgfbr3O88393 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Tgfbr3O88393 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Gm11452-201ENSMUST00000122376 690 ntBASIC16.07■□□□□ 0.16
Tgfbr3O88393 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Tgfbr3O88393 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Tgfbr3O88393 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.06■□□□□ 0.16
Tgfbr3O88393 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 AW822252-206ENSMUST00000208904 237 ntBASIC16.06■□□□□ 0.16
Tgfbr3O88393 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Tgfbr3O88393 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.05■□□□□ 0.16
Tgfbr3O88393 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.05■□□□□ 0.16
Tgfbr3O88393 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Tgfbr3O88393 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms