Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc4a4O88343 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc4a4O88343 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc4a4O88343 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc4a4O88343 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc4a4O88343 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc4a4O88343 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Slc4a4O88343 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc4a4O88343 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc4a4O88343 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc4a4O88343 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Slc4a4O88343 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC20.02■□□□□ 0.8
Slc4a4O88343 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc4a4O88343 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Slc4a4O88343 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc4a4O88343 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc4a4O88343 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC20.02■□□□□ 0.79
Slc4a4O88343 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Slc4a4O88343 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc4a4O88343 Gm8258-201ENSMUST00000055593 1449 ntBASIC20.02■□□□□ 0.79
Slc4a4O88343 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 Gm11355-201ENSMUST00000121120 306 ntBASIC20.01■□□□□ 0.79
Slc4a4O88343 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.01■□□□□ 0.79
Slc4a4O88343 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.01■□□□□ 0.79
Slc4a4O88343 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.01■□□□□ 0.79
Slc4a4O88343 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC20.01■□□□□ 0.79
Slc4a4O88343 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.01■□□□□ 0.79
Slc4a4O88343 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Slc4a4O88343 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Slc4a4O88343 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc4a4O88343 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc4a4O88343 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Slc4a4O88343 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Slc4a4O88343 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc4a4O88343 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc4a4O88343 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Slc4a4O88343 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC20■□□□□ 0.79
Slc4a4O88343 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc4a4O88343 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc4a4O88343 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC20■□□□□ 0.79
Slc4a4O88343 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20■□□□□ 0.79
Slc4a4O88343 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc4a4O88343 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Slc4a4O88343 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20■□□□□ 0.79
Slc4a4O88343 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc4a4O88343 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc4a4O88343 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc4a4O88343 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Slc4a4O88343 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.99■□□□□ 0.79
Slc4a4O88343 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Slc4a4O88343 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Slc4a4O88343 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Slc4a4O88343 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Slc4a4O88343 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc4a4O88343 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc4a4O88343 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc4a4O88343 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc4a4O88343 Gm25016-201ENSMUST00000158399 131 ntBASIC19.98■□□□□ 0.79
Slc4a4O88343 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc4a4O88343 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc4a4O88343 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Slc4a4O88343 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Slc4a4O88343 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc4a4O88343 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc4a4O88343 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Slc4a4O88343 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Slc4a4O88343 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc4a4O88343 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Slc4a4O88343 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc4a4O88343 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc4a4O88343 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Slc4a4O88343 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms