Protein–RNA interactions for Protein: O70309

Itgb5, Integrin beta-5, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb5O70309 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb5O70309 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb5O70309 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.81■□□□□ 0.6
Itgb5O70309 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb5O70309 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.81■□□□□ 0.6
Itgb5O70309 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb5O70309 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb5O70309 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb5O70309 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb5O70309 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb5O70309 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Itgb5O70309 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Itgb5O70309 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb5O70309 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb5O70309 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb5O70309 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.8■□□□□ 0.6
Itgb5O70309 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb5O70309 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Itgb5O70309 Gm27742-201ENSMUST00000184667 60 ntBASIC18.8■□□□□ 0.6
Itgb5O70309 Gm45328-201ENSMUST00000210942 917 ntBASIC18.8■□□□□ 0.6
Itgb5O70309 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb5O70309 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Itgb5O70309 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Itgb5O70309 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb5O70309 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb5O70309 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.8■□□□□ 0.6
Itgb5O70309 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb5O70309 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb5O70309 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Itgb5O70309 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.79■□□□□ 0.6
Itgb5O70309 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb5O70309 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb5O70309 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Itgb5O70309 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb5O70309 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb5O70309 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.79■□□□□ 0.6
Itgb5O70309 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb5O70309 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.79■□□□□ 0.6
Itgb5O70309 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.79■□□□□ 0.6
Itgb5O70309 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb5O70309 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Itgb5O70309 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb5O70309 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb5O70309 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb5O70309 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb5O70309 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb5O70309 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb5O70309 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Itgb5O70309 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb5O70309 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb5O70309 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb5O70309 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.78■□□□□ 0.6
Itgb5O70309 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb5O70309 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb5O70309 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Itgb5O70309 Gm17807-201ENSMUST00000186869 298 ntBASIC18.78■□□□□ 0.6
Itgb5O70309 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.78■□□□□ 0.6
Itgb5O70309 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.78■□□□□ 0.6
Itgb5O70309 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb5O70309 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb5O70309 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb5O70309 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb5O70309 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Itgb5O70309 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Itgb5O70309 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Itgb5O70309 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Itgb5O70309 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.77■□□□□ 0.6
Itgb5O70309 Olfr129-201ENSMUST00000122318 993 ntBASIC18.77■□□□□ 0.6
Itgb5O70309 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.77■□□□□ 0.6
Itgb5O70309 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.77■□□□□ 0.6
Itgb5O70309 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Itgb5O70309 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.77■□□□□ 0.6
Itgb5O70309 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Itgb5O70309 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.77■□□□□ 0.6
Itgb5O70309 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Itgb5O70309 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Itgb5O70309 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Itgb5O70309 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Itgb5O70309 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Itgb5O70309 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.77■□□□□ 0.59
Itgb5O70309 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb5O70309 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb5O70309 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb5O70309 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.76■□□□□ 0.59
Itgb5O70309 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb5O70309 Gm15794-201ENSMUST00000120182 631 ntBASIC18.76■□□□□ 0.59
Itgb5O70309 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb5O70309 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb5O70309 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.76■□□□□ 0.59
Itgb5O70309 Gm18421-201ENSMUST00000204122 625 ntBASIC18.76■□□□□ 0.59
Itgb5O70309 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb5O70309 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Itgb5O70309 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb5O70309 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb5O70309 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb5O70309 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Itgb5O70309 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Itgb5O70309 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb5O70309 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Itgb5O70309 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms