Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Sdc4O35988 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.48■□□□□ 0.39
Sdc4O35988 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sdc4O35988 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Sdc4O35988 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sdc4O35988 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.47■□□□□ 0.39
Sdc4O35988 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc4O35988 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc4O35988 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc4O35988 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Sdc4O35988 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc4O35988 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.47■□□□□ 0.39
Sdc4O35988 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.47■□□□□ 0.39
Sdc4O35988 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc4O35988 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc4O35988 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc4O35988 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc4O35988 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sdc4O35988 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc4O35988 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sdc4O35988 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc4O35988 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdc4O35988 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.47■□□□□ 0.39
Sdc4O35988 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc4O35988 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc4O35988 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc4O35988 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc4O35988 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc4O35988 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc4O35988 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sdc4O35988 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sdc4O35988 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Sdc4O35988 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc4O35988 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sdc4O35988 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.46■□□□□ 0.39
Sdc4O35988 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc4O35988 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdc4O35988 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Sdc4O35988 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sdc4O35988 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sdc4O35988 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc4O35988 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sdc4O35988 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Sdc4O35988 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Sdc4O35988 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc4O35988 Gm29518-201ENSMUST00000190858 372 ntBASIC17.45■□□□□ 0.38
Sdc4O35988 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Sdc4O35988 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sdc4O35988 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc4O35988 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc4O35988 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.45■□□□□ 0.38
Sdc4O35988 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdc4O35988 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc4O35988 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc4O35988 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sdc4O35988 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Sdc4O35988 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc4O35988 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc4O35988 Gm7284-201ENSMUST00000131667 944 ntBASIC17.44■□□□□ 0.38
Sdc4O35988 Gm17808-201ENSMUST00000200859 894 ntBASIC17.44■□□□□ 0.38
Sdc4O35988 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.44■□□□□ 0.38
Sdc4O35988 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc4O35988 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sdc4O35988 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc4O35988 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc4O35988 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc4O35988 Gm10819-201ENSMUST00000099988 561 ntBASIC17.44■□□□□ 0.38
Sdc4O35988 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sdc4O35988 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc4O35988 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sdc4O35988 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc4O35988 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc4O35988 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdc4O35988 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.43■□□□□ 0.38
Sdc4O35988 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Sdc4O35988 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc4O35988 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc4O35988 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc4O35988 Gm37722-201ENSMUST00000193757 208 ntBASIC17.43■□□□□ 0.38
Sdc4O35988 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Sdc4O35988 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc4O35988 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.43■□□□□ 0.38
Sdc4O35988 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.43■□□□□ 0.38
Sdc4O35988 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc4O35988 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc4O35988 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc4O35988 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sdc4O35988 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdc4O35988 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sdc4O35988 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc4O35988 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.42■□□□□ 0.38
Sdc4O35988 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdc4O35988 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.42■□□□□ 0.38
Sdc4O35988 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms