Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.67■□□□□ 0.58
SpibO35906 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SpibO35906 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.67■□□□□ 0.58
SpibO35906 Gm13884-201ENSMUST00000118103 829 ntBASIC18.67■□□□□ 0.58
SpibO35906 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SpibO35906 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.67■□□□□ 0.58
SpibO35906 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.67■□□□□ 0.58
SpibO35906 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SpibO35906 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SpibO35906 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.67■□□□□ 0.58
SpibO35906 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SpibO35906 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SpibO35906 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SpibO35906 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SpibO35906 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SpibO35906 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SpibO35906 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SpibO35906 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SpibO35906 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SpibO35906 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.66■□□□□ 0.58
SpibO35906 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SpibO35906 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SpibO35906 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SpibO35906 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
SpibO35906 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SpibO35906 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SpibO35906 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SpibO35906 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SpibO35906 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SpibO35906 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC18.65■□□□□ 0.58
SpibO35906 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SpibO35906 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SpibO35906 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SpibO35906 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SpibO35906 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SpibO35906 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SpibO35906 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SpibO35906 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SpibO35906 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SpibO35906 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.65■□□□□ 0.58
SpibO35906 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.65■□□□□ 0.58
SpibO35906 Gm28659-201ENSMUST00000188013 759 ntBASIC18.65■□□□□ 0.58
SpibO35906 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SpibO35906 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.65■□□□□ 0.58
SpibO35906 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SpibO35906 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SpibO35906 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SpibO35906 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SpibO35906 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SpibO35906 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SpibO35906 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SpibO35906 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
SpibO35906 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SpibO35906 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SpibO35906 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SpibO35906 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SpibO35906 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC18.64■□□□□ 0.57
SpibO35906 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SpibO35906 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SpibO35906 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SpibO35906 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SpibO35906 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SpibO35906 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SpibO35906 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SpibO35906 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SpibO35906 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
SpibO35906 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.63■□□□□ 0.57
SpibO35906 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.63■□□□□ 0.57
SpibO35906 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Mir8098-201ENSMUST00000184011 137 ntBASIC18.63■□□□□ 0.57
SpibO35906 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.63■□□□□ 0.57
SpibO35906 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
SpibO35906 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SpibO35906 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SpibO35906 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SpibO35906 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.62■□□□□ 0.57
SpibO35906 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SpibO35906 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SpibO35906 Gm13312-201ENSMUST00000119631 718 ntBASIC18.62■□□□□ 0.57
SpibO35906 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.62■□□□□ 0.57
SpibO35906 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SpibO35906 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.62■□□□□ 0.57
SpibO35906 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SpibO35906 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms