Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capn1O35350 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capn1O35350 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capn1O35350 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capn1O35350 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capn1O35350 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.7■□□□□ 0.1
Capn1O35350 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.7■□□□□ 0.1
Capn1O35350 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.7■□□□□ 0.1
Capn1O35350 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capn1O35350 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capn1O35350 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Capn1O35350 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capn1O35350 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Capn1O35350 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.7■□□□□ 0.1
Capn1O35350 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Capn1O35350 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capn1O35350 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Capn1O35350 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Capn1O35350 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.69■□□□□ 0.1
Capn1O35350 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capn1O35350 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capn1O35350 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capn1O35350 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capn1O35350 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Capn1O35350 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capn1O35350 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Capn1O35350 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capn1O35350 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.69■□□□□ 0.1
Capn1O35350 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capn1O35350 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Capn1O35350 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC15.69■□□□□ 0.1
Capn1O35350 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.69■□□□□ 0.1
Capn1O35350 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capn1O35350 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capn1O35350 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.69■□□□□ 0.1
Capn1O35350 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Capn1O35350 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capn1O35350 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.69■□□□□ 0.1
Capn1O35350 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Capn1O35350 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Capn1O35350 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
Capn1O35350 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Capn1O35350 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.68■□□□□ 0.1
Capn1O35350 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Capn1O35350 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Gm7638-201ENSMUST00000121348 967 ntBASIC15.68■□□□□ 0.1
Capn1O35350 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC15.68■□□□□ 0.1
Capn1O35350 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Gm29791-202ENSMUST00000207888 369 ntBASIC15.68■□□□□ 0.1
Capn1O35350 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Capn1O35350 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Capn1O35350 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Capn1O35350 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Capn1O35350 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Capn1O35350 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Capn1O35350 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Capn1O35350 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.67■□□□□ 0.1
Capn1O35350 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.67■□□□□ 0.1
Capn1O35350 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Capn1O35350 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.67■□□□□ 0.1
Capn1O35350 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC15.67■□□□□ 0.1
Capn1O35350 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.67■□□□□ 0.1
Capn1O35350 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.67■□□□□ 0.1
Capn1O35350 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Capn1O35350 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.67■□□□□ 0.1
Capn1O35350 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Capn1O35350 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms