Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.59■□□□□ 0.41
Ebf3O08791 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf3O08791 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf3O08791 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Ebf3O08791 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ebf3O08791 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.58■□□□□ 0.41
Ebf3O08791 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Ebf3O08791 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ebf3O08791 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf3O08791 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf3O08791 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.58■□□□□ 0.4
Ebf3O08791 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf3O08791 Gm26039-201ENSMUST00000158152 144 ntBASIC17.58■□□□□ 0.4
Ebf3O08791 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.58■□□□□ 0.4
Ebf3O08791 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.58■□□□□ 0.4
Ebf3O08791 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Ebf3O08791 Gm17971-201ENSMUST00000190239 806 ntBASIC17.58■□□□□ 0.4
Ebf3O08791 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.58■□□□□ 0.4
Ebf3O08791 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf3O08791 Gm10566-201ENSMUST00000086739 996 ntBASIC17.58■□□□□ 0.4
Ebf3O08791 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Ebf3O08791 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf3O08791 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.58■□□□□ 0.4
Ebf3O08791 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf3O08791 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ebf3O08791 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.57■□□□□ 0.4
Ebf3O08791 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf3O08791 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf3O08791 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf3O08791 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf3O08791 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf3O08791 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf3O08791 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf3O08791 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.57■□□□□ 0.4
Ebf3O08791 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ebf3O08791 Gm17807-201ENSMUST00000186869 298 ntBASIC17.57■□□□□ 0.4
Ebf3O08791 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.57■□□□□ 0.4
Ebf3O08791 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Ebf3O08791 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ebf3O08791 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf3O08791 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf3O08791 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf3O08791 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ebf3O08791 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf3O08791 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Ebf3O08791 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.56■□□□□ 0.4
Ebf3O08791 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ebf3O08791 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf3O08791 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf3O08791 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ebf3O08791 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf3O08791 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf3O08791 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf3O08791 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Ebf3O08791 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf3O08791 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf3O08791 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf3O08791 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ebf3O08791 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.55■□□□□ 0.4
Ebf3O08791 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.55■□□□□ 0.4
Ebf3O08791 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 Gm28033-201ENSMUST00000184224 96 ntBASIC17.55■□□□□ 0.4
Ebf3O08791 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Ebf3O08791 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ebf3O08791 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ebf3O08791 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf3O08791 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf3O08791 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf3O08791 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf3O08791 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf3O08791 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.54■□□□□ 0.4
Ebf3O08791 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf3O08791 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf3O08791 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf3O08791 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Ebf3O08791 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf3O08791 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Ebf3O08791 Idnk-204ENSMUST00000226010 1898 ntBASIC17.54■□□□□ 0.4
Ebf3O08791 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ebf3O08791 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ebf3O08791 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Ebf3O08791 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf3O08791 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf3O08791 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Ebf3O08791 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf3O08791 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.53■□□□□ 0.4
Ebf3O08791 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ebf3O08791 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms