Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Tnfrsf11bO08712 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Tnfrsf11bO08712 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Tnfrsf11bO08712 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Gm10653-202ENSMUST00000139570 835 ntBASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Tnfrsf11bO08712 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Gm12085-201ENSMUST00000119263 940 ntBASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Tnfrsf11bO08712 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Gm29257-201ENSMUST00000186115 639 ntBASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Gm9731-201ENSMUST00000209480 747 ntBASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Tnfrsf11bO08712 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms