Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.04■□□□□ 0.48
Gm17535J3KMR8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Gm17535J3KMR8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Gm17535J3KMR8 Gm7367-201ENSMUST00000057611 492 ntBASIC18.04■□□□□ 0.48
Gm17535J3KMR8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm17535J3KMR8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm17535J3KMR8 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm17535J3KMR8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Gm17535J3KMR8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm17535J3KMR8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.04■□□□□ 0.48
Gm17535J3KMR8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Gm17535J3KMR8 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Gm11950-201ENSMUST00000121615 838 ntBASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Gm44450-201ENSMUST00000199528 114 ntBASIC18.03■□□□□ 0.48
Gm17535J3KMR8 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm17535J3KMR8 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm17535J3KMR8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm17535J3KMR8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm17535J3KMR8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm17535J3KMR8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Gm17535J3KMR8 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Gm17535J3KMR8 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.02■□□□□ 0.48
Gm17535J3KMR8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.02■□□□□ 0.48
Gm17535J3KMR8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.02■□□□□ 0.48
Gm17535J3KMR8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm17535J3KMR8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm17535J3KMR8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm17535J3KMR8 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Gm17535J3KMR8 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm17535J3KMR8 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.02■□□□□ 0.47
Gm17535J3KMR8 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm17535J3KMR8 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gm17535J3KMR8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm17535J3KMR8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.47
Gm17535J3KMR8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.02■□□□□ 0.47
Gm17535J3KMR8 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Gm17535J3KMR8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Gm6623-201ENSMUST00000173570 544 ntBASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm17535J3KMR8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm17535J3KMR8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Gm17535J3KMR8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm17535J3KMR8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Gm17535J3KMR8 Gm7284-201ENSMUST00000131667 944 ntBASIC18■□□□□ 0.47
Gm17535J3KMR8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
Gm17535J3KMR8 Gm27704-201ENSMUST00000185094 107 ntBASIC18■□□□□ 0.47
Gm17535J3KMR8 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm17535J3KMR8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Gm17535J3KMR8 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18■□□□□ 0.47
Gm17535J3KMR8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm17535J3KMR8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm17535J3KMR8 Gm45203-201ENSMUST00000206384 1831 ntBASIC18■□□□□ 0.47
Gm17535J3KMR8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm17535J3KMR8 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Gm17535J3KMR8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm17535J3KMR8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm17535J3KMR8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm17535J3KMR8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm17535J3KMR8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.99■□□□□ 0.47
Gm17535J3KMR8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm17535J3KMR8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm17535J3KMR8 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.99■□□□□ 0.47
Gm17535J3KMR8 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Gm17535J3KMR8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Gm17535J3KMR8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm17535J3KMR8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm17535J3KMR8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms