Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Gm27742-201ENSMUST00000184667 60 ntBASIC17.2■□□□□ 0.34
Ccdc149F6V035 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccdc149F6V035 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Gm11336-201ENSMUST00000118168 334 ntBASIC17.19■□□□□ 0.34
Ccdc149F6V035 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.19■□□□□ 0.34
Ccdc149F6V035 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc149F6V035 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Gm13186-201ENSMUST00000118031 316 ntBASIC17.18■□□□□ 0.34
Ccdc149F6V035 Mir3081-201ENSMUST00000175305 84 ntBASIC17.18■□□□□ 0.34
Ccdc149F6V035 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccdc149F6V035 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc149F6V035 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc149F6V035 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc149F6V035 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc149F6V035 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc149F6V035 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc149F6V035 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.17■□□□□ 0.34
Ccdc149F6V035 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc149F6V035 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc149F6V035 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc149F6V035 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.17■□□□□ 0.34
Ccdc149F6V035 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc149F6V035 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc149F6V035 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc149F6V035 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Gm27357-201ENSMUST00000183754 135 ntBASIC17.16■□□□□ 0.34
Ccdc149F6V035 Gm28033-201ENSMUST00000184224 96 ntBASIC17.16■□□□□ 0.34
Ccdc149F6V035 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc149F6V035 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ccdc149F6V035 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms