Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3hdm1E9Q9Q2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
R3hdm1E9Q9Q2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3hdm1E9Q9Q2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3hdm1E9Q9Q2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
R3hdm1E9Q9Q2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3hdm1E9Q9Q2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3hdm1E9Q9Q2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
R3hdm1E9Q9Q2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
R3hdm1E9Q9Q2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Gm27459-201ENSMUST00000184860 107 ntBASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Gm37722-201ENSMUST00000193757 208 ntBASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
R3hdm1E9Q9Q2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
R3hdm1E9Q9Q2 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
R3hdm1E9Q9Q2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
R3hdm1E9Q9Q2 Tgds-204ENSMUST00000228543 1594 ntBASIC18.64■□□□□ 0.58
R3hdm1E9Q9Q2 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
R3hdm1E9Q9Q2 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
R3hdm1E9Q9Q2 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Gm37025-201ENSMUST00000195159 829 ntBASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Gm43347-201ENSMUST00000200226 580 ntBASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
R3hdm1E9Q9Q2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms