Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Gm5587-201ENSMUST00000206270 674 ntBASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb9E9Q5G2 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Gm9013-201ENSMUST00000132939 882 ntBASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Gm37722-201ENSMUST00000193757 208 ntBASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb9E9Q5G2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Gm43294-201ENSMUST00000202850 2490 ntBASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdhb9E9Q5G2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Gm25016-201ENSMUST00000158399 131 ntBASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdhb9E9Q5G2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdhb9E9Q5G2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Pcdhb9E9Q5G2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms