Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Srp54bE9PXC0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.69■□□□□ 0.26
Srp54bE9PXC0 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Srp54bE9PXC0 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp54bE9PXC0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Srp54bE9PXC0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp54bE9PXC0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Srp54bE9PXC0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp54bE9PXC0 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp54bE9PXC0 Gm45328-201ENSMUST00000210942 917 ntBASIC16.68■□□□□ 0.26
Srp54bE9PXC0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp54bE9PXC0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp54bE9PXC0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp54bE9PXC0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp54bE9PXC0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp54bE9PXC0 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Srp54bE9PXC0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Srp54bE9PXC0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Gm28033-201ENSMUST00000184224 96 ntBASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Srp54bE9PXC0 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Gm27742-201ENSMUST00000184667 60 ntBASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Gm17971-201ENSMUST00000190239 806 ntBASIC16.66■□□□□ 0.26
Srp54bE9PXC0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Gm18669-201ENSMUST00000216049 778 ntBASIC16.66■□□□□ 0.26
Srp54bE9PXC0 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Srp54bE9PXC0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Srp54bE9PXC0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Srp54bE9PXC0 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp54bE9PXC0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp54bE9PXC0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp54bE9PXC0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp54bE9PXC0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.64■□□□□ 0.25
Srp54bE9PXC0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Srp54bE9PXC0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Srp54bE9PXC0 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp54bE9PXC0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Srp54bE9PXC0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp54bE9PXC0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Srp54bE9PXC0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Srp54bE9PXC0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Srp54bE9PXC0 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Gm5421-201ENSMUST00000181698 2354 ntBASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Gm11336-201ENSMUST00000118168 334 ntBASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Mir3081-201ENSMUST00000175305 84 ntBASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Srp54bE9PXC0 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms